BaseCounter Class Reference

#include <SequenceBuffer.h>

Public Member Functions
	BaseCounter (const std::string &Source)
void	addCount (Base base, size_t amount)
void	checkOverallCounter () const
void	calcOverallCounter ()
void	startLineCounter ()
void	addLine (const std::string &line)
void	expectEqual (const BaseCounter &other) const
size_t	getCount (Base base) const

Detailed Description

Definition at line 38 of file SequenceBuffer.h.

Constructor & Destructor Documentation

BaseCounter::BaseCounter ( const std::string &  Source )

inline

Definition at line 47 of file SequenceBuffer.h.

References BC_COUNTERS.

Member Function Documentation

void BaseCounter::addCount ( Base  base, size_t  amount  )

inline

Definition at line 53 of file SequenceBuffer.h.

Referenced by parseCounter().

void BaseCounter::checkOverallCounter

(

)

const

Definition at line 42 of file SequenceBuffer.cxx.

References arb_test::all(), BC_ALL, GBS_global_string(), and gi_assert.

Referenced by expectEqual().

void BaseCounter::calcOverallCounter

(

)

Definition at line 30 of file SequenceBuffer.cxx.

References arb_test::all(), BC_ALL, and gi_assert.

void BaseCounter::startLineCounter

(

)

Definition at line 83 of file SequenceBuffer.cxx.

References gi_assert.

Referenced by SequenceBuffer::SequenceBuffer().

void BaseCounter::addLine ( const std::string &  line )

inline

Definition at line 58 of file SequenceBuffer.h.

References CharCounter::countChars(), gi_assert, and SmartPtr< T, C >::isNull().

Referenced by SequenceBuffer::addLine().

void BaseCounter::expectEqual

(

const BaseCounter &

other

)

const

Definition at line 89 of file SequenceBuffer.cxx.

References BC_ALL, BC_COUNTERS, BC_OTHER, checkOverallCounter(), error(), and GBS_global_string().

Referenced by Importer::check_base_counters().

size_t BaseCounter::getCount ( Base  base ) const

inline

Definition at line 64 of file SequenceBuffer.h.

Referenced by Importer::check_base_counters().

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The documentation for this class was generated from the following files:

• GENOM_IMPORT/SequenceBuffer.h
• GENOM_IMPORT/SequenceBuffer.cxx