SEC_db.cxx File Reference

#include "SEC_graphic.hxx"
#include "SEC_root.hxx"
#include "SEC_bonddef.hxx"
#include "SEC_toggle.hxx"
#include <aw_awars.hxx>
#include <aw_file.hxx>
#include <aw_msg.hxx>
#include <aw_root.hxx>
#include <ed4_extern.hxx>
#include <arbdbt.h>
#include <ad_cb.h>
#include <arb_defs.h>

Include dependency graph for SEC_db.cxx:

Go to the source code of this file.

Classes
struct	SEC_dbcb
struct	PairDefinition

Macros
#define	AWAR_PAIRS(type)   AWAR_SECEDIT_##type##_PAIRS
#define	AWAR_PCHAR(type)   AWAR_SECEDIT_##type##_PAIR_CHAR
#define	PAIR_TYPES   5

Typedefs
typedef void(SEC_db_interface::*	interface_cb )(const SEC_dbcb *)

Functions
static void	sec_dbcb (UNFIXED, const SEC_dbcb *cb)
static void	pair_def_changed_cb (AW_root *aw_root, SEC_db_interface *db, const char *awar_name)
static void	bind_bonddef_awars (SEC_db_interface *db)
static void	create_awars (AW_root *aw_root, AW_default def)

Variables
static PairDefinition	pairdef [PAIR_TYPES]
static const char *	update_pos_awars []
static const char *	relayout_awars []
static const char *	refresh_awars []

Macro Definition Documentation

#define AWAR_PAIRS

(

type

)

AWAR_SECEDIT_##type##_PAIRS

Definition at line 69 of file SEC_db.cxx.

#define AWAR_PCHAR

(

type

)

AWAR_SECEDIT_##type##_PAIR_CHAR

Definition at line 70 of file SEC_db.cxx.

#define PAIR_TYPES   5

Definition at line 79 of file SEC_db.cxx.

Referenced by bind_bonddef_awars(), create_awars(), and SEC_bond_def::update().

Typedef Documentation

typedef void(SEC_db_interface::* interface_cb)(const SEC_dbcb *)

Definition at line 32 of file SEC_db.cxx.

Function Documentation

static void sec_dbcb ( UNFIXED  , const SEC_dbcb *  cb  )

static

Definition at line 42 of file SEC_db.cxx.

References SEC_dbcb::call().

Referenced by SEC_db_interface::SEC_db_interface(), SEC_seq_data::SEC_seq_data(), and SEC_seq_data::~SEC_seq_data().

static void pair_def_changed_cb ( AW_root *  aw_root, SEC_db_interface *  db, const char *  awar_name  )

static

Definition at line 141 of file SEC_db.cxx.

References aw_message(), SEC_db_interface::bonds(), SEC_db_interface::canvas(), AWT_canvas::request_refresh(), and SEC_bond_def::update().

Referenced by bind_bonddef_awars().

static void bind_bonddef_awars ( SEC_db_interface *  db )

static

Definition at line 148 of file SEC_db.cxx.

References AW_awar::add_callback(), AW_root::awar(), PairDefinition::awar_pairchar, PairDefinition::awar_pairs, SEC_db_interface::awroot(), NULp, pair_def_changed_cb(), and PAIR_TYPES.

Referenced by SEC_db_interface::SEC_db_interface().

static void create_awars ( AW_root *  aw_root, AW_default  def  )

static

Definition at line 364 of file SEC_db.cxx.

References ARB_strdup(), AW_create_fileselection_awars(), AW_root::awar_float(), AWAR_FOOTER, AW_root::awar_int(), PairDefinition::awar_pairchar, PairDefinition::awar_pairs, AWAR_SECEDIT_BASELINEWIDTH, AWAR_SECEDIT_BOND_THICKNESS, AWAR_SECEDIT_DISPLAY_SAI, AWAR_SECEDIT_DISPLAY_SEARCH, AWAR_SECEDIT_DISPPOS_BINDING, AWAR_SECEDIT_DISPPOS_ECOLI, AWAR_SECEDIT_DIST_BETW_STRANDS, AWAR_SECEDIT_HIDE_BASES, AWAR_SECEDIT_SAVEDIR, AWAR_SECEDIT_SHOW_BONDS, AWAR_SECEDIT_SHOW_CURPOS, AWAR_SECEDIT_SHOW_DEBUG, AWAR_SECEDIT_SHOW_ECOLI_POS, AWAR_SECEDIT_SHOW_HELIX_NRS, AWAR_SECEDIT_SHOW_STR_SKELETON, AWAR_SECEDIT_SKELETON_THICKNESS, AW_root::awar_string(), PairDefinition::default_pairchar, PairDefinition::default_pairs, GB_path_in_arbprop(), PAIR_TYPES, AW_awar::set_minmax(), SHOW_ABS_CURPOS, and SHOW_HELIX_BONDS.

Referenced by MP_Main::MP_Main(), and SEC_db_interface::SEC_db_interface().

Variable Documentation

PairDefinition pairdef[PAIR_TYPES]

static

Initial value:

= {
    { AWAR_PAIRS(STRONG), AWAR_PCHAR(STRONG), "GC AU AT",                   "-" },
    { AWAR_PAIRS(NORMAL), AWAR_PCHAR(NORMAL), "GU GT",                      "." },
    { AWAR_PAIRS(WEAK),   AWAR_PCHAR(WEAK),   "GA",                         "o" },
    { AWAR_PAIRS(NO),     AWAR_PCHAR(NO),     "AA AC CC CU CT GG UU TT TU", ""  },
    { AWAR_PAIRS(USER),   AWAR_PCHAR(USER),   "",                           ""  },
}

Definition at line 80 of file SEC_db.cxx.

Referenced by helix_pairs_changed_cb().

const char* update_pos_awars[]

static

Initial value:

= {
    AWAR_SECEDIT_DISPPOS_BINDING,
    AWAR_SECEDIT_DISPPOS_ECOLI,
    NULp
}

Definition at line 325 of file SEC_db.cxx.

const char* relayout_awars[]

static

Initial value:

= {
    AWAR_SECEDIT_DIST_BETW_STRANDS,
    NULp
}

Definition at line 331 of file SEC_db.cxx.

const char* refresh_awars[]

static

Initial value:

= {
    AWAR_SECEDIT_SHOW_HELIX_NRS,
    AWAR_SECEDIT_SHOW_BONDS,
    AWAR_SECEDIT_SHOW_CURPOS,
    AWAR_SECEDIT_HIDE_BASES,
    AWAR_SECEDIT_SHOW_ECOLI_POS,
    AWAR_SECEDIT_DISPLAY_SEARCH,
    AWAR_SECEDIT_DISPLAY_SAI,
    AWAR_SECEDIT_SHOW_STR_SKELETON,
    AWAR_SECEDIT_SKELETON_THICKNESS,
    AWAR_SECEDIT_BOND_THICKNESS,
    AWAR_EDIT_RIGHTWARD,
    ED4_AWAR_SEARCH_RESULT_CHANGED,


 
    NULp
}

Definition at line 336 of file SEC_db.cxx.