Directory | Changes | Lines of Code | Lines per Change |
---|---|---|---|
Totals | 189 (100.0%) | 48311 (100.0%) | 255.6 |
GDE/RAxML/ | 39 (20.6%) | 37908 (78.5%) | 972.0 |
GENOM/ | 17 (9.0%) | 975 (2.0%) | 57.3 |
GDE/MOLPHY/ | 1 (0.5%) | 811 (1.7%) | 811.0 |
AWT/ | 9 (4.8%) | 681 (1.4%) | 75.6 |
EDIT4/ | 2 (1.1%) | 521 (1.1%) | 260.5 |
GDE/PHYLIP/ | 1 (0.5%) | 486 (1.0%) | 486.0 |
NTREE/ | 8 (4.2%) | 471 (1.0%) | 58.8 |
ARBDB2/ | 1 (0.5%) | 389 (0.8%) | 389.0 |
WINDOW/ | 5 (2.6%) | 315 (0.7%) | 63.0 |
TOOLS/ | 3 (1.6%) | 296 (0.6%) | 98.6 |
NALIGNER/ | 1 (0.5%) | 295 (0.6%) | 295.0 |
MULTI_PROBE/ | 1 (0.5%) | 292 (0.6%) | 292.0 |
ORS_CGI/ | 2 (1.1%) | 258 (0.5%) | 129.0 |
DIST/ | 1 (0.5%) | 242 (0.5%) | 242.0 |
PARSIMONY/ | 1 (0.5%) | 233 (0.5%) | 233.0 |
ARBDB/ | 7 (3.7%) | 230 (0.5%) | 32.8 |
GDE/CLUSTALW/ | 1 (0.5%) | 226 (0.5%) | 226.0 |
PROBE/ | 4 (2.1%) | 213 (0.4%) | 53.2 |
AWTI/ | 9 (4.8%) | 213 (0.4%) | 23.6 |
AWTC/ | 2 (1.1%) | 210 (0.4%) | 105.0 |
PHYLO/ | 1 (0.5%) | 200 (0.4%) | 200.0 |
ARBDBS/ | 1 (0.5%) | 189 (0.4%) | 189.0 |
ARB_GDE/ | 1 (0.5%) | 171 (0.4%) | 171.0 |
SECEDIT/ | 1 (0.5%) | 164 (0.3%) | 164.0 |
PERL2ARB/ | 2 (1.1%) | 156 (0.3%) | 78.0 |
MERGE/ | 1 (0.5%) | 156 (0.3%) | 156.0 |
ALIV3/ | 1 (0.5%) | 150 (0.3%) | 150.0 |
ORS_SERVER/ | 1 (0.5%) | 141 (0.3%) | 141.0 |
ARBDBPP/ | 1 (0.5%) | 141 (0.3%) | 141.0 |
CONSENSUS_TREE/ | 1 (0.5%) | 119 (0.2%) | 119.0 |
GDE/CORE/ | 1 (0.5%) | 116 (0.2%) | 116.0 |
SEER/ | 1 (0.5%) | 114 (0.2%) | 114.0 |
CONVERTALN/ | 1 (0.5%) | 102 (0.2%) | 102.0 |
ARBDB_COMPRESS/ | 1 (0.5%) | 101 (0.2%) | 101.0 |
EDIT/ | 1 (0.5%) | 94 (0.2%) | 94.0 |
GDE/HGL_SRC/ | 2 (1.1%) | 87 (0.2%) | 43.5 |
STAT/ | 1 (0.5%) | 79 (0.2%) | 79.0 |
GDEHELP/MENUS/ | 7 (3.7%) | 77 (0.2%) | 11.0 |
GDE/SUPPORT/ | 1 (0.5%) | 77 (0.2%) | 77.0 |
GDE/CLUSTAL/ | 1 (0.5%) | 68 (0.1%) | 68.0 |
PROBE_DESIGN/ | 5 (2.6%) | 57 (0.1%) | 11.4 |
lib/nas/ | 1 (0.5%) | 55 (0.1%) | 55.0 |
ALEIO/ | 1 (0.5%) | 53 (0.1%) | 53.0 |
TRS/ | 1 (0.5%) | 50 (0.1%) | 50.0 |
GDE/LOOPTOOL/ | 1 (0.5%) | 47 (0.1%) | 47.0 |
TEST/ | 1 (0.5%) | 45 (0.1%) | 45.0 |
AISC/ | 1 (0.5%) | 35 (0.1%) | 35.0 |
NAMES/ | 1 (0.5%) | 26 (0.1%) | 26.0 |
/ | 12 (6.3%) | 24 (0.0%) | 2.0 |
WETC/ | 1 (0.5%) | 20 (0.0%) | 20.0 |
CAT/ | 1 (0.5%) | 19 (0.0%) | 19.0 |
AWDEMO/ | 1 (0.5%) | 18 (0.0%) | 18.0 |
lib/pictures/awt/ | 2 (1.1%) | 15 (0.0%) | 7.5 |
SH/ | 1 (0.5%) | 12 (0.0%) | 12.0 |
READSEQ/ | 1 (0.5%) | 12 (0.0%) | 12.0 |
DBSERVER/ | 1 (0.5%) | 12 (0.0%) | 12.0 |
GENOM_IMPORT/ | 3 (1.6%) | 10 (0.0%) | 3.3 |
lib/ | 1 (0.5%) | 7 (0.0%) | 7.0 |
GDE/FASTDNAML/ | 1 (0.5%) | 7 (0.0%) | 7.0 |
AISC_MKPTPS/ | 1 (0.5%) | 6 (0.0%) | 6.0 |
PRIMER_DESIGN/ | 1 (0.5%) | 3 (0.0%) | 3.0 |
GDEHELP/ | 2 (1.1%) | 3 (0.0%) | 1.5 |
EISPACK/ | 1 (0.5%) | 3 (0.0%) | 3.0 |
SERVERCNTRL/ | 1 (0.5%) | 2 (0.0%) | 2.0 |
AISC_COM/C/ | 2 (1.1%) | 2 (0.0%) | 1.0 |
ptpan/ | 1 (0.5%) | 1 (0.0%) | 1.0 |
mesaglw und mesaglw-devel added to list of packages to install for
compiling ARB with OpenGL=1 under OpenSuSE
5 lines of code changed in 1 file:
added gcc 4.3 to Makefile-->supported compiler versions
added mesa and freeglut to list of packages to install for compiling
arb with OpenGL=1 in arb_INSTALL.txt
4 lines of code changed in 2 files:
xterm added to list of packages to install
2 lines of code changed in 2 files:
MetaTags PROJECT and PR added as MT_BASIC
3 lines of code changed in 1 file:
(Elmar) strlen + 2 weil sowohl die "\0" als auch die "~" brauchen platz
PT_buildtree.cxx
- newtreename = (STRPTR) malloc(strlen(pg->pg_IndexName) + 1);
+ newtreename = (STRPTR) malloc(strlen(pg->pg_IndexName) + 2);
1 lines of code changed in 1 file:
ticket #140 removed "\\" from the path to "arb_who". --> "check server"
works!
1 lines of code changed in 1 file:
fixed buffer overflow
1 lines of code changed in 1 file:
RATEMODEL-Orders changed
3 lines of code changed in 1 file:
Parameternamen ge��ndert: MODELOFNUCSUB--> RATEMODELNUC
RATEMODEL-->RATEMODELPROT
12 lines of code changed in 1 file:
Parameter umbenannt: MODELOFNUCSUB --> RATEMODELNUC
RATEMODEL-->RATEMODELPROT
9 lines of code changed in 1 file:
add and remove raxml menue files
48 lines of code changed in 3 files:
raxmldna raxmlprotein menues introduced
2 lines of code changed in 1 file:
raxml7.0.0 introduce, RAxML5 removed
37908 lines of code changed in 39 files:
outputs now RAxML_result.treefile instead of RAxML_parsimonyTree.treefile
16 lines of code changed in 1 file:
Fixed NULL-Pointer termination for default_background_color list in call from AWT_graphic_tree::init_devices to AW_manage_GC
1 lines of code changed in 1 file:
now gcc 3.3.1 allowed
1 lines of code changed in 1 file:
gcc3.3.1; link GL instead GLw
1 lines of code changed in 1 file:
test
1 lines of code changed in 1 file:
AWT/AWT_codon_table.cxx: kommentare eingef�gt, GENOM_IMPORT/GAGenomImport.cpp: Feldbezeichner/Fehlermeldungen korrigiert
19 lines of code changed in 2 files:
bugfix (crashed when previously selected pt-sever did not exist in current arb_tcp.dat)
5 lines of code changed in 1 file:
(56 more)