- s -

• SAI_GC_0 : SaiProbeVisualization.hxx
• SAI_GC_1 : SaiProbeVisualization.hxx
• SAI_GC_2 : SaiProbeVisualization.hxx
• SAI_GC_3 : SaiProbeVisualization.hxx
• SAI_GC_4 : SaiProbeVisualization.hxx
• SAI_GC_5 : SaiProbeVisualization.hxx
• SAI_GC_6 : SaiProbeVisualization.hxx
• SAI_GC_7 : SaiProbeVisualization.hxx
• SAI_GC_8 : SaiProbeVisualization.hxx
• SAI_GC_9 : SaiProbeVisualization.hxx
• SAI_GC_FOREGROUND : SaiProbeVisualization.hxx
• SAI_GC_FOREGROUND_FONT : SaiProbeVisualization.hxx
• SAI_GC_HIGHLIGHT : SaiProbeVisualization.hxx
• SAI_GC_HIGHLIGHT_FONT : SaiProbeVisualization.hxx
• SAI_GC_MAX : SaiProbeVisualization.hxx
• SAI_GC_PROBE : SaiProbeVisualization.hxx
• SAI_GC_PROBE_FONT : SaiProbeVisualization.hxx
• SAS_ALL : calculator.h
• SAS_COMMON : calculator.h
• SAS_SELECTED : calculator.h
• SAS_TARGET : calculator.h
• SAVE : db_query.cxx
• SBO_AND : saiop.h
• SBO_FIRST : saiop.h
• SBO_NAND : saiop.h
• SBO_NOR : saiop.h
• SBO_OR : saiop.h
• SBO_XNOR : saiop.h
• SBO_XOR : saiop.h
• SCALE_LENGTH : TreeDisplay.cxx
• SCALE_LENGTH_PRESERVING : TreeDisplay.cxx
• SCALE_SPREAD : TreeDisplay.cxx
• SCAN_ALL_FIELDS : xfergui.h
• SCAN_INPUT_FIELDS : xfergui.h
• SCAN_OUTPUT_FIELDS : xfergui.h
• SEARCH_ALL_TREES : NT_group_search.cxx
• SEARCH_BROTHER : arbdb.h
• SEARCH_CHILD : arbdb.h
• SEARCH_CHILD_OF_NEXT : arbdb.h
• SEARCH_CURRENT_TREE : NT_group_search.cxx
• SEARCH_GRANDCHILD : arbdb.h
• SEARCH_NEXT_BROTHER : arbdb.h
• SEARCH_PATTERNS : ed4_search.hxx
• SEARCH_SELECTED_TREES : NT_group_search.cxx
• SEC : arb_sleep.h
• SEC_ANY_TYPE : SEC_root.hxx
• SEC_BUGS : arb_help2xml.cxx
• SEC_DESCRIPTION : arb_help2xml.cxx
• SEC_EXAMPLES : arb_help2xml.cxx
• SEC_FAKE : arb_help2xml.cxx
• SEC_GC_BONDS : SEC_gc.hxx
• SEC_GC_CBACK_0 : SEC_gc.hxx
• SEC_GC_CBACK_1 : SEC_gc.hxx
• SEC_GC_CBACK_2 : SEC_gc.hxx
• SEC_GC_CBACK_3 : SEC_gc.hxx
• SEC_GC_CBACK_4 : SEC_gc.hxx
• SEC_GC_CBACK_5 : SEC_gc.hxx
• SEC_GC_CBACK_6 : SEC_gc.hxx
• SEC_GC_CBACK_7 : SEC_gc.hxx
• SEC_GC_CBACK_8 : SEC_gc.hxx
• SEC_GC_CBACK_9 : SEC_gc.hxx
• SEC_GC_CURSOR : SEC_gc.hxx
• SEC_GC_DEFAULT : SEC_gc.hxx
• SEC_GC_ECOLI : SEC_gc.hxx
• SEC_GC_ERROR : SEC_gc.hxx
• SEC_GC_FIRST_DATA : SEC_gc.hxx
• SEC_GC_FIRST_FONT : SEC_gc.hxx
• SEC_GC_HELIX : SEC_gc.hxx
• SEC_GC_HELIX_NO : SEC_gc.hxx
• SEC_GC_LAST_DATA : SEC_gc.hxx
• SEC_GC_LAST_FONT : SEC_gc.hxx
• SEC_GC_LOOP : SEC_gc.hxx
• SEC_GC_MAX : SEC_gc.hxx
• SEC_GC_MBACK : SEC_gc.hxx
• SEC_GC_NHELIX : SEC_gc.hxx
• SEC_GC_SBACK_0 : SEC_gc.hxx
• SEC_GC_SBACK_1 : SEC_gc.hxx
• SEC_GC_SBACK_2 : SEC_gc.hxx
• SEC_GC_SBACK_3 : SEC_gc.hxx
• SEC_GC_SBACK_4 : SEC_gc.hxx
• SEC_GC_SBACK_5 : SEC_gc.hxx
• SEC_GC_SBACK_6 : SEC_gc.hxx
• SEC_GC_SBACK_7 : SEC_gc.hxx
• SEC_GC_SBACK_8 : SEC_gc.hxx
• SEC_HELIX : SEC_root.hxx
• SEC_LOOP : SEC_root.hxx
• SEC_NO_TYPE : SEC_root.hxx
• SEC_NONE : arb_help2xml.cxx
• SEC_NOTES : arb_help2xml.cxx
• SEC_OCCURRENCE : arb_help2xml.cxx
• SEC_SECTION : arb_help2xml.cxx
• SEC_SKELE_HELIX : SEC_gc.hxx
• SEC_SKELE_LOOP : SEC_gc.hxx
• SEC_SKELE_NHELIX : SEC_gc.hxx
• SEC_UPDATE_OK : SEC_graphic.hxx
• SEC_UPDATE_RECOUNT : SEC_graphic.hxx
• SEC_UPDATE_RELOAD : SEC_graphic.hxx
• SEC_UPDATE_SHOWN_POSITIONS : SEC_graphic.hxx
• SEC_WARNINGS : arb_help2xml.cxx
• SECSTRUCT_SECSTRUCT : ed4_protein_2nd_structure.hxx
• SECSTRUCT_SEQUENCE : ed4_protein_2nd_structure.hxx
• SECSTRUCT_SEQUENCE_PREDICT : ed4_protein_2nd_structure.hxx
• SEL_CLUSTER : DI_clusters.cxx
• SELECTED_BAD_ALI : ED4_detect_bad_ali.cxx
• SELECTED_FIELD : AWT_config_manager.cxx
• SELECTED_SPECIES : ED4_detect_bad_ali.cxx
• SEQUENCE : AP_buffer.hxx
• SER : AP_seq_simple_pro.hxx
• ServerMode : ali_pt.hxx
• SETUP : TestEnvironment.cxx
• SF_ALLOW_NEW : item_sel_list.h
• SF_HIDDEN : item_sel_list.h
• SF_PSEUDO : item_sel_list.h
• SF_SHOW_TYPE : item_sel_list.h
• SF_STANDARD : item_sel_list.h
• SHAPE_MAX : RNA3D_Textures.hxx
• SHOW_ABS_CURPOS : SEC_root.hxx
• SHOW_BASE_CURPOS : SEC_root.hxx
• SHOW_ECOLI_CURPOS : SEC_root.hxx
• SHOW_HELIX_BONDS : SEC_root.hxx
• SHOW_NHELIX_BONDS : SEC_root.hxx
• SHOW_NO_BONDS : SEC_root.hxx
• SHOW_NO_CURPOS : SEC_root.hxx
• SHOWN_CLUSTERS : di_foundclusters.hxx
• SIMILARITY : di_protdist.hxx
• SIMPLE_RESHADE : item_shader.h
• SIMPLE_TYPE : arb_proto_2_xsub.cxx
• SINGLE_COLUMNS : insdel.h
• SINGLE_NODE : adoptimize.cxx
• SKIP_COLUMN_IF_MAX : phylo.hxx
• SKIP_COLUMN_IF_OCCUR : phylo.hxx
• SKIP_FOLDED_EDGES : pars_awars.h
• SKIP_INNER_EDGES : pars_awars.h
• SKIP_LEAF_EDGES : pars_awars.h
• SKIP_UNMARKED_EDGES : pars_awars.h
• SM_ANY : admatch.cxx
• SM_INVALID : admatch.cxx
• SM_REGEXPR : admatch.cxx
• SM_WILDCARDED : admatch.cxx
• SOP_ACI : saiop.h
• SOP_BOOLCHAIN : saiop.h
• SOP_MATRIX : saiop.h
• SOP_TRANSLATE : saiop.h
• SORT_ALPHA : AW_file.cxx
• SORT_BY_CLUSTERSIZE : di_foundclusters.hxx
• SORT_BY_MAX_DIST : di_foundclusters.hxx
• SORT_BY_MEANDIST : di_foundclusters.hxx
• SORT_BY_MIN_BASES : di_foundclusters.hxx
• SORT_BY_MIN_DIST : di_foundclusters.hxx
• SORT_BY_MISMATCHES : arb_probe_match.cxx
• SORT_BY_TREEPOSITION : di_foundclusters.hxx
• SORT_BY_WEIGHTED_MISMATCHES : arb_probe_match.cxx
• SORT_BY_WEIGHTED_MISMATCHES_W_POS_AND_STRENGTH : arb_probe_match.cxx
• SORT_DATE : AW_file.cxx
• SORT_REVERSE : di_foundclusters.hxx
• SORT_SIZE : AW_file.cxx
• SOURCE_ADMIN : AliAdmin.h
• SPAWN_ASYNCHRONOUS : servercntrl.h
• SPAWN_DAEMONIZED : servercntrl.h
• SpecifiedMode : ali_pt.hxx
• SPLIT_DROPEMPTY : arb_strarray.h
• SPLIT_KEEPEMPTY : arb_strarray.h
• SRC_DB : merge.hxx
• ST_A : st_ml.hxx
• ST_C : st_ml.hxx
• ST_G : st_ml.hxx
• ST_GAP : st_ml.hxx
• ST_MAX_BASE : st_ml.hxx
• ST_QUALITY_REPORT_NONE : st_window.hxx
• ST_QUALITY_REPORT_TEMP : st_window.hxx
• ST_QUALITY_REPORT_YES : st_window.hxx
• ST_T : st_ml.hxx
• ST_UNDEFINED : AW_Xm.cxx
• ST_UNKNOWN : st_ml.hxx
• STAGE1 : probe.h
• STAGE2 : probe.h
• STANDARD_CALL : aisc_commands.c
• STAR : RNA3D_Textures.hxx
• STAR_SMOOTH : RNA3D_Textures.hxx
• STOP : AP_seq_simple_pro.hxx
• STORED_CLUSTERS : di_foundclusters.hxx
• STORED_COMMENTS : AWT_config_manager.cxx
• STRUCT_BAD_MATCH : ed4_protein_2nd_structure.hxx
• STRUCT_GOOD_MATCH : ed4_protein_2nd_structure.hxx
• STRUCT_MEDIUM_MATCH : ed4_protein_2nd_structure.hxx
• STRUCT_NO_MATCH : ed4_protein_2nd_structure.hxx
• STRUCT_PERFECT_MATCH : ed4_protein_2nd_structure.hxx
• STRUCT_UNKNOWN : ed4_protein_2nd_structure.hxx
• STRUCTURE : AP_buffer.hxx
• STRUCTURE_BACKBONE : RNA3D_StructureData.hxx
• STRUCTURE_BACKBONE_CLR : RNA3D_StructureData.hxx
• STRUCTURE_POS : RNA3D_StructureData.hxx
• STRUCTURE_POS_ANCHOR : RNA3D_StructureData.hxx
• STRUCTURE_SUMMARY : ed4_protein_2nd_structure.hxx
• SWISSPROT : fun.h
• SXS_LISTED_SPECIES : MG_species.cxx
• SXS_SELECTED_SPECIES : MG_species.cxx
• SXT_SINGLE_FIELD : MG_species.cxx
• SXT_USING_FTS : MG_species.cxx
• SXT_USING_FTS_SKIP_ALI : MG_species.cxx
• SXT_WHOLE_SPECIES : MG_species.cxx