|
| ED4_consensus_sequence_terminal (const char *id, AW_pos width, AW_pos height, ED4_manager *parent) |
|
virtual | ~ED4_consensus_sequence_terminal () |
|
int | get_length () const OVERRIDE |
|
char * | get_sequence_copy (int *str_len=NULp) const FINAL_OVERRIDE |
|
| DECLARE_DUMP_FOR_LEAFCLASS (ED4_sequence_terminal) |
|
| ED4_sequence_terminal (const char *id, AW_pos width, AW_pos height, ED4_manager *parent, bool shall_display_secstruct_info_) |
|
GB_alignment_type | GetAliType () FINAL_OVERRIDE |
|
void | deleted_from_database () OVERRIDE |
|
void | set_secstruct_display (bool show) |
|
ED4_SearchResults & | results () const |
|
ED4_columnStat_terminal * | corresponding_columnStat_terminal () const |
|
| DECLARE_DUMP_FOR_MIDCLASS (ED4_sequence_terminal, ED4_abstract_sequence_terminal) |
|
| PREPARE_MARK_NONFINAL_CLASS (ED4_sequence_terminal) |
|
| ED4_abstract_sequence_terminal (const ED4_objspec &spec_, const char *id, AW_pos width, AW_pos height, ED4_manager *parent) |
|
| ~ED4_abstract_sequence_terminal () OVERRIDE |
|
ED4_species_name_terminal * | corresponding_species_name_terminal () const |
|
PosRange | calc_interval_displayed_in_rectangle (AW_screen_area *area_rect) |
|
PosRange | calc_update_interval () |
|
| DECLARE_DUMP_FOR_BASECLASS (ED4_abstract_sequence_terminal, ED4_text_terminal) |
|
| E4B_AVOID_UNNEEDED_CASTS (text_terminal) |
|
| ED4_text_terminal (const ED4_objspec &spec_, GB_CSTR id, AW_pos width, AW_pos height, ED4_manager *parent) |
|
| ~ED4_text_terminal () OVERRIDE |
|
| DECLARE_DUMP_FOR_BASECLASS (ED4_text_terminal, ED4_terminal) |
|
| DECLARE_DUMP_FOR_BASECLASS (ED4_terminal, ED4_base) |
|
void | changed_by_database () OVERRIDE |
|
void | Show (bool refresh_all, bool is_cleared) OVERRIDE |
|
bool | calc_bounding_box () FINAL_OVERRIDE |
|
ED4_returncode | draw_drag_box (AW_pos x, AW_pos y, GB_CSTR text=NULp, int cursor_y=-1) |
|
void | request_refresh (int clear=1) FINAL_OVERRIDE |
|
void | resize_requested_children () OVERRIDE |
|
void | update_requested_children () OVERRIDE |
|
void | delete_requested_children () OVERRIDE |
|
void | Delete () OVERRIDE |
|
ED4_returncode | event_sent_by_parent (AW_event *event, AW_window *aww) OVERRIDE |
|
ED4_returncode | kill_object () |
|
ED4_base * | search_ID (const char *id) OVERRIDE |
|
char * | resolve_pointer_to_string_copy (int *str_len=NULp) const FINAL_OVERRIDE |
|
const char * | resolve_pointer_to_char_pntr (int *str_len=NULp) const FINAL_OVERRIDE |
|
void | remove_callbacks () FINAL_OVERRIDE |
|
GB_ERROR | write_sequence (const char *seq, int seq_len) |
|
void | scroll_into_view (ED4_window *ed4w) |
|
bool | setCursorTo (ED4_cursor *cursor, int seq_pos, bool unfoldGroups, ED4_CursorJumpType jump_type) |
|
bool | is_hidden () const FINAL_OVERRIDE |
|
| ED4_terminal (const ED4_objspec &spec_, GB_CSTR id, AW_pos width, AW_pos height, ED4_manager *parent) |
|
| ~ED4_terminal () OVERRIDE |
|
void | draw_bb (int color) |
|
| DECLARE_DUMP_FOR_ROOTCLASS (ED4_base) |
|
GBDATA * | get_species_pointer () const |
|
void | set_species_pointer (GBDATA *gbd) |
|
bool | has_callback () const |
|
int | adjust_clipping_rectangle () |
|
void | resize_dynamic () |
|
ED4_returncode | clear_background (int color=0) |
|
void | set_links (ED4_base *width_ref, ED4_base *height_ref) |
|
void | set_both_links (ED4_base *ref) |
|
void | set_property (ED4_properties prop) |
|
void | clr_property (ED4_properties prop) |
|
bool | has_property (ED4_properties prop) const |
|
void | calc_rel_coords (AW_pos *x, AW_pos *y) |
|
void | calc_world_coords (AW_pos *x, AW_pos *y) const |
|
const AW::Position & | calc_world_coords () const |
|
void | update_world_coords_cache () const |
|
AW::Rectangle | get_win_area (ED4_window *ed4w) const |
|
void | request_resize () |
|
void | request_resize_of_linked () |
|
void | resize_requested_by_link (ED4_base *link) |
|
void | set_update () |
|
virtual ARB_ERROR | route_down_hierarchy (const ED4_route_cb &cb) |
|
int | calc_group_depth () |
|
void | check_all () |
|
short | in_border (AW_pos abs_x, AW_pos abs_y, ED4_movemode mode) |
|
ED4_returncode | set_width () |
|
ED4_AREA_LEVEL | get_area_level (ED4_multi_species_manager **multi_species_manager=NULp) const |
|
ED4_manager * | get_parent (ED4_level lev) const |
|
void | unlink_from_parent () |
|
bool | has_parent (ED4_manager *Parent) |
|
bool | is_child_of (ED4_manager *Parent) |
|
ED4_group_manager * | is_in_folded_group () const |
|
char * | get_name_of_species () |
|
ED4_terminal * | get_next_terminal () |
|
ED4_terminal * | get_prev_terminal () |
|
void | generate_configuration_string (GBS_strstruct &buffer) |
|
const ED4_terminal * | get_consensus_relevant_terminal () const |
|
| ED4_base (const ED4_objspec &spec_, GB_CSTR id, AW_pos width, AW_pos height, ED4_manager *parent) |
|
virtual | ~ED4_base () |
|
int | is_terminal () const |
|
int | is_text_terminal () const |
|
int | is_species_name_terminal () const |
|
int | is_sequence_info_terminal () const |
|
int | is_sequence_terminal () const |
|
int | is_orf_terminal () const |
|
int | is_pure_text_terminal () const |
|
int | is_columnStat_terminal () const |
|
int | is_bracket_terminal () const |
|
int | is_spacer_terminal () const |
|
int | is_line_terminal () const |
|
int | is_flag_header_terminal () const |
|
int | is_flag_terminal () const |
|
int | is_manager () const |
|
int | is_sequence_manager () const |
|
int | is_multi_name_manager () const |
|
int | is_name_manager () const |
|
int | is_multi_species_manager () const |
|
int | is_multi_sequence_manager () const |
|
int | is_device_manager () const |
|
int | is_group_manager () const |
|
int | is_root_group_manager () const |
|
int | is_abstract_group_manager () const |
|
int | is_species_manager () const |
|
int | is_area_manager () const |
|
| E4B_DECL_CASTOP (area_manager) |
|
| E4B_DECL_CASTOP (abstract_group_manager) |
|
| E4B_DECL_CASTOP (bracket_terminal) |
|
| E4B_DECL_CASTOP (columnStat_terminal) |
|
| E4B_DECL_CASTOP (consensus_sequence_terminal) |
|
| E4B_DECL_CASTOP (device_manager) |
|
| E4B_DECL_CASTOP (group_manager) |
|
| E4B_DECL_CASTOP (line_terminal) |
|
| E4B_DECL_CASTOP (manager) |
|
| E4B_DECL_CASTOP (multi_name_manager) |
|
| E4B_DECL_CASTOP (multi_sequence_manager) |
|
| E4B_DECL_CASTOP (multi_species_manager) |
|
| E4B_DECL_CASTOP (name_manager) |
|
| E4B_DECL_CASTOP (orf_terminal) |
|
| E4B_DECL_CASTOP (pure_text_terminal) |
|
| E4B_DECL_CASTOP (root_group_manager) |
|
| E4B_DECL_CASTOP (sequence_info_terminal) |
|
| E4B_DECL_CASTOP (sequence_manager) |
|
| E4B_DECL_CASTOP (sequence_terminal) |
|
| E4B_DECL_CASTOP (spacer_terminal) |
|
| E4B_DECL_CASTOP (species_manager) |
|
| E4B_DECL_CASTOP (species_name_terminal) |
|
| E4B_DECL_CASTOP (terminal) |
|
| E4B_DECL_CASTOP (text_terminal) |
|
| E4B_DECL_CASTOP (flag_header_terminal) |
|
| E4B_DECL_CASTOP (flag_terminal) |
|
ED4_species_manager * | containing_species_manager () const |
|
bool | is_consensus_manager () const |
|
bool | is_SAI_manager () const |
|
bool | is_species_seq_manager () const |
|
ED4_species_type | get_species_type () const |
|
bool | inside_consensus_manager () const |
|
bool | inside_SAI_manager () const |
|
bool | inside_species_seq_manager () const |
|
bool | is_consensus_terminal () const |
|
bool | is_SAI_terminal () const |
|
bool | is_species_seq_terminal () const |
|
bool | is_consensus_sequence_terminal () const |
|
Definition at line 2113 of file ed4_class.hxx.