#include <ed4_class.hxx>

Inheritance diagram for ED4_orf_terminal:

Collaboration diagram for ED4_orf_terminal:

Public Member Functions
	ED4_orf_terminal (const char id, AW_pos width, AW_pos height, ED4_manager parent)

	~ED4_orf_terminal () OVERRIDE

GB_alignment_type	GetAliType () OVERRIDE

void	SET_aaSeqFlags (int startPos, int strandType)

void	SET_aaSequence (const char *aaSeq)

void	SET_aaColor (const char *aaSeq)

int	GET_aaStartPos ()

int	GET_aaStrandType ()

	DECLARE_DUMP_FOR_LEAFCLASS (ED4_abstract_sequence_terminal)

Public Member Functions inherited from ED4_abstract_sequence_terminal
	ED4_abstract_sequence_terminal (const ED4_objspec &spec_, const char id, AW_pos width, AW_pos height, ED4_manager parent)

	~ED4_abstract_sequence_terminal () OVERRIDE

int	get_length () const OVERRIDE

ED4_species_name_terminal *	corresponding_species_name_terminal () const

PosRange	calc_interval_displayed_in_rectangle (AW_screen_area *area_rect)

PosRange	calc_update_interval ()

	DECLARE_DUMP_FOR_BASECLASS (ED4_abstract_sequence_terminal, ED4_text_terminal)

Public Member Functions inherited from ED4_text_terminal
	E4B_AVOID_UNNEEDED_CASTS (text_terminal)

void	deleted_from_database () OVERRIDE

	ED4_text_terminal (const ED4_objspec &spec_, GB_CSTR id, AW_pos width, AW_pos height, ED4_manager *parent)

	~ED4_text_terminal () OVERRIDE

	DECLARE_DUMP_FOR_BASECLASS (ED4_text_terminal, ED4_terminal)

Public Member Functions inherited from ED4_terminal
	DECLARE_DUMP_FOR_BASECLASS (ED4_terminal, ED4_base)

void	changed_by_database () OVERRIDE

void	Show (bool refresh_all, bool is_cleared) OVERRIDE

bool	calc_bounding_box () FINAL_OVERRIDE

ED4_returncode	draw_drag_box (AW_pos x, AW_pos y, GB_CSTR text=NULp, int cursor_y=-1)

void	request_refresh (int clear=1) FINAL_OVERRIDE

void	resize_requested_children () OVERRIDE

void	update_requested_children () OVERRIDE

void	delete_requested_children () OVERRIDE

void	Delete () OVERRIDE

ED4_returncode	event_sent_by_parent (AW_event event, AW_window aww) OVERRIDE

ED4_returncode	kill_object ()

ED4_base *	search_ID (const char *id) OVERRIDE

char *	resolve_pointer_to_string_copy (int *str_len=NULp) const FINAL_OVERRIDE

const char *	resolve_pointer_to_char_pntr (int *str_len=NULp) const FINAL_OVERRIDE

void	remove_callbacks () FINAL_OVERRIDE

GB_ERROR	write_sequence (const char *seq, int seq_len)

void	scroll_into_view (ED4_window *ed4w)

bool	setCursorTo (ED4_cursor *cursor, int seq_pos, bool unfoldGroups, ED4_CursorJumpType jump_type)

bool	is_hidden () const FINAL_OVERRIDE

	ED4_terminal (const ED4_objspec &spec_, GB_CSTR id, AW_pos width, AW_pos height, ED4_manager *parent)

	~ED4_terminal () OVERRIDE

Public Member Functions inherited from ED4_base
void	draw_bb (int color)

	DECLARE_DUMP_FOR_ROOTCLASS (ED4_base)

GBDATA *	get_species_pointer () const

void	set_species_pointer (GBDATA *gbd)

bool	has_callback () const

int	adjust_clipping_rectangle ()

void	resize_dynamic ()

ED4_returncode	clear_background (int color=0)

void	set_links (ED4_base width_ref, ED4_base height_ref)

void	set_both_links (ED4_base *ref)

void	set_property (ED4_properties prop)

void	clr_property (ED4_properties prop)

bool	has_property (ED4_properties prop) const

void	calc_rel_coords (AW_pos x, AW_pos y)

void	calc_world_coords (AW_pos x, AW_pos y) const

const AW::Position &	calc_world_coords () const

void	update_world_coords_cache () const

AW::Rectangle	get_win_area (ED4_window *ed4w) const

void	request_resize ()

void	request_resize_of_linked ()

void	resize_requested_by_link (ED4_base *link)

void	set_update ()

virtual ARB_ERROR	route_down_hierarchy (const ED4_route_cb &cb)

int	calc_group_depth ()

void	check_all ()

short	in_border (AW_pos abs_x, AW_pos abs_y, ED4_movemode mode)

ED4_returncode	set_width ()

ED4_AREA_LEVEL	get_area_level (ED4_multi_species_manager **multi_species_manager=NULp) const

ED4_manager *	get_parent (ED4_level lev) const

void	unlink_from_parent ()

bool	has_parent (ED4_manager *Parent)

bool	is_child_of (ED4_manager *Parent)

ED4_group_manager *	is_in_folded_group () const

char *	get_name_of_species ()

ED4_terminal *	get_next_terminal ()

ED4_terminal *	get_prev_terminal ()

void	generate_configuration_string (GBS_strstruct &buffer)

const ED4_terminal *	get_consensus_relevant_terminal () const

	ED4_base (const ED4_objspec &spec_, GB_CSTR id, AW_pos width, AW_pos height, ED4_manager *parent)

virtual	~ED4_base ()

int	is_terminal () const

int	is_text_terminal () const

int	is_species_name_terminal () const

int	is_sequence_info_terminal () const

int	is_sequence_terminal () const

int	is_orf_terminal () const

int	is_pure_text_terminal () const

int	is_columnStat_terminal () const

int	is_bracket_terminal () const

int	is_spacer_terminal () const

int	is_line_terminal () const

int	is_flag_header_terminal () const

int	is_flag_terminal () const

int	is_manager () const

int	is_sequence_manager () const

int	is_multi_name_manager () const

int	is_name_manager () const

int	is_multi_species_manager () const

int	is_multi_sequence_manager () const

int	is_device_manager () const

int	is_group_manager () const

int	is_root_group_manager () const

int	is_abstract_group_manager () const

int	is_species_manager () const

int	is_area_manager () const

	E4B_DECL_CASTOP (area_manager)

	E4B_DECL_CASTOP (abstract_group_manager)

	E4B_DECL_CASTOP (bracket_terminal)

	E4B_DECL_CASTOP (columnStat_terminal)

	E4B_DECL_CASTOP (consensus_sequence_terminal)

	E4B_DECL_CASTOP (device_manager)

	E4B_DECL_CASTOP (group_manager)

	E4B_DECL_CASTOP (line_terminal)

	E4B_DECL_CASTOP (manager)

	E4B_DECL_CASTOP (multi_name_manager)

	E4B_DECL_CASTOP (multi_sequence_manager)

	E4B_DECL_CASTOP (multi_species_manager)

	E4B_DECL_CASTOP (name_manager)

	E4B_DECL_CASTOP (orf_terminal)

	E4B_DECL_CASTOP (pure_text_terminal)

	E4B_DECL_CASTOP (root_group_manager)

	E4B_DECL_CASTOP (sequence_info_terminal)

	E4B_DECL_CASTOP (sequence_manager)

	E4B_DECL_CASTOP (sequence_terminal)

	E4B_DECL_CASTOP (spacer_terminal)

	E4B_DECL_CASTOP (species_manager)

	E4B_DECL_CASTOP (species_name_terminal)

	E4B_DECL_CASTOP (terminal)

	E4B_DECL_CASTOP (text_terminal)

	E4B_DECL_CASTOP (flag_header_terminal)

	E4B_DECL_CASTOP (flag_terminal)

ED4_species_manager *	containing_species_manager () const

bool	is_consensus_manager () const

bool	is_SAI_manager () const

bool	is_species_seq_manager () const

ED4_species_type	get_species_type () const

bool	inside_consensus_manager () const

bool	inside_SAI_manager () const

bool	inside_species_seq_manager () const

bool	is_consensus_terminal () const

bool	is_SAI_terminal () const

bool	is_species_seq_terminal () const

bool	is_consensus_sequence_terminal () const

Additional Inherited Members
Static Public Member Functions inherited from ED4_base
static void	touch_world_cache ()

Public Attributes inherited from ED4_abstract_sequence_terminal
char *	species_name

Public Attributes inherited from ED4_terminal
struct {
unsigned int deleted: 1

}	tflag

long	curr_timestamp

Public Attributes inherited from ED4_base
const ED4_objspec &	spec

ED4_manager *	parent

ED4_properties	dynamic_prop

char *	id

ED4_index	index

ED4_base *	width_link

ED4_base *	height_link

ED4_extension	extension

ED4_update_info	update_info

struct {
unsigned int hidden: 1

}	flag