/trunk Developers: murban

Login name:
murban
Total Commits:
56 (0.1%)
Lines of Code:
3,145 (0.1%)
Most Recent Commit:
2008-03-21 01:43
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Activity in Directories

Directory Changes Lines of Code Lines per Change
Totals 56 (100.0%) 3145 (100.0%) 56.1
EDIT4/ 23 (41.1%) 2127 (67.6%) 92.4
HELP_SOURCE/oldhelp/ 10 (17.9%) 406 (12.9%) 40.6
lib/import/ 8 (14.3%) 187 (5.9%) 23.3
PERL_SCRIPTS/ARBTOOLS/IFTHELP/ 3 (5.4%) 141 (4.5%) 47.0
NTREE/ 5 (8.9%) 123 (3.9%) 24.6
PERL_SCRIPTS/IFTHELP/ 2 (3.6%) 108 (3.4%) 54.0
lib/protein_2nd_structure/ 5 (8.9%) 53 (1.7%) 10.6

Activity of murban

Most Recent Commits

murban 2008-03-21 01:43 Rev.: 5261

bugfix: struct pfold_match_type_awars changed

4 lines of code changed in 1 file:

  • EDIT4: ED4_main.cxx (+4 -4)
murban 2008-03-21 01:21 Rev.: 5260

added doxygen comments; added help; bugfix: order of amino_acids

1194 lines of code changed in 17 files:

  • EDIT4: ED4_protein_2nd_structure.cxx (+283 -485), ED4_root.cxx (+2 -2), ED4_text_terminals.cxx (+18 -82), ed4_protein_2nd_structure.hxx (+494 -75)
  • HELP_SOURCE/oldhelp: alignment.hlp (+1), arb.hlp (+4 -2), arb_import.hlp (+2 -1), dssp_ift.hlp (new 115), e4.hlp (+1 -1), pfold.hlp (+78 -17), pfold_props.hlp (new 118), pfold_sai.hlp (new 47)
  • NTREE: NT_extern.cxx (+1), ad_spec.cxx (+29 -6), ad_spec.hxx (+1 -1)
  • lib/protein_2nd_structure: CFParam.dat (del), CFParamNorm.dat (del)
murban 2008-03-05 15:42 Rev.: 5206

updated functions for protein structure comparison; added menu entry in EDIT4 for protein match settings; added help

861 lines of code changed in 14 files:

  • EDIT4: ED4_main.cxx (+20 -12), ED4_manager.cxx (+8 -3), ED4_no_class.cxx (-89), ED4_protein_2nd_structure.cxx (+514 -795), ED4_root.cxx (+12 -3), ED4_text_terminals.cxx (+13 -15), ed4_awars.hxx (-1), ed4_class.hxx (-7), ed4_protein_2nd_structure.hxx (+160 -38)
  • HELP_SOURCE/oldhelp: e4.hlp (+1), pfold.hlp (new 39)
  • NTREE: ad_spec.cxx (+91), ad_spec.hxx (+1)
  • lib/protein_2nd_structure: CFParam.dat (+2 -1)
murban 2008-02-08 20:13 Rev.: 5044

added functions for protein structure comparison; added import filters and perl script for dssp files; added menu entry in EDIT4 for choosing the active protein structure SAI

1042 lines of code changed in 21 files:

  • EDIT4: ED4_cursor.cxx (+6 -1), ED4_main.cxx (+5 -16), ED4_no_class.cxx (+90 -1), ED4_protein_2nd_structure.cxx (+337 -200), ED4_root.cxx (+2), ED4_text_terminals.cxx (+97 -39), ed4_awars.hxx (+1), ed4_class.hxx (+3), ed4_protein_2nd_structure.hxx (+58 -2)
  • PERL_SCRIPTS/ARBTOOLS/IFTHELP: dssp2fasta.pl (del), format_dssp.pl (new 104)
  • PERL_SCRIPTS/IFTHELP: format_dssp.pl (new 107)
  • lib/import: dssp.ift (del), dssp_2nd_struct.ift (new 7), dssp_2nd_struct2.ift2 (new 52), dssp_all.ift (new 7), dssp_all2.ift2 (new 56), dssp_sequence.ift (new 7), dssp_sequence2.ift2 (new 52)
  • lib/protein_2nd_structure: CFParam.dat (new 25), CFParamNorm.dat (new 26)
murban 2007-12-06 17:07 Rev.: 4979

- dssp import filter

6 lines of code changed in 1 file:

  • lib/import: dssp.ift (new 6)
murban 2007-12-06 17:06 Rev.: 4978

- dssp -> fasta converter

38 lines of code changed in 2 files:

  • PERL_SCRIPTS/ARBTOOLS/IFTHELP: dssp2fasta.pl (new 37)
  • PERL_SCRIPTS/IFTHELP: dssp2fasta.pl (new 1)
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