ArbProbeCollection Class Reference

#include <probe_collection.hxx>

Inheritance diagram for ArbProbeCollection:

Collaboration diagram for ArbProbeCollection:

Public Member Functions
	ArbProbeCollection ()
	ArbProbeCollection (const char *pName)
	ArbProbeCollection (const ArbProbeCollection &rCopy)
virtual	~ArbProbeCollection ()
ArbProbeCollection &	operator= (const ArbProbeCollection &rCopy)
bool	openXML (const char *pFileAndPath, std::string &rErrorMessage)
bool	saveXML (const char *pFileAndPath) const
void	setParameters (const float aValues[16], float dWidth, float dBias)
void	getParameters (float aValues[16], float &dWidth, float &dBias) const
const ArbProbePtrList &	probeList () const
const ArbProbeMatchWeighting &	matchWeighting () const
const ArbProbe *	find (const char *pSequence) const
bool	add (const char *pName, const char *pSequence, const ArbProbe **ppProbe=NULp)
bool	replace (const char *oldSequence, const char *pName, const char *pSequence, const ArbProbe **ppProbe=NULp)
bool	remove (const char *pSequence)
bool	clear ()
void	name (const char *pName)
const std::string &	name () const
bool	hasChanged () const
bool	hasProbes () const
Public Member Functions inherited from ArbRefCount
	ArbRefCount ()
	ArbRefCount (const ArbRefCount &)
virtual	~ArbRefCount ()
void	lock () const
bool	unlock () const
void	free () const

Detailed Description

Definition at line 195 of file probe_collection.hxx.

Constructor & Destructor Documentation

ArbProbeCollection::ArbProbeCollection

(

)

Definition at line 661 of file probe_collection.cxx.

ArbProbeCollection::ArbProbeCollection

(

const char *

pName

)

Definition at line 672 of file probe_collection.cxx.

References name().

ArbProbeCollection::ArbProbeCollection

(

const ArbProbeCollection &

rCopy

)

Definition at line 689 of file probe_collection.cxx.

References name().

ArbProbeCollection::~ArbProbeCollection ( )

virtual

Definition at line 703 of file probe_collection.cxx.

Member Function Documentation

ArbProbeCollection & ArbProbeCollection::operator=

(

const ArbProbeCollection &

rCopy

)

Definition at line 709 of file probe_collection.cxx.

References name().

bool ArbProbeCollection::openXML	(	const char *	pFileAndPath,
		std::string &	rErrorMessage
	)

Definition at line 761 of file probe_collection.cxx.

References add(), elementHasName(), ArbProbeMatchWeighting::initialise(), Initialize(), isElement(), message(), name(), and NULp.

Referenced by load_probe_collection().

bool ArbProbeCollection::saveXML

(

const char *

pFileAndPath

)

const

Definition at line 942 of file probe_collection.cxx.

References ArbProbeMatchWeighting::writeXML(), and ArbProbe::writeXML().

Referenced by save_probe_collection().

void ArbProbeCollection::setParameters	(	const float	aValues[16],
		float	dWidth,
		float	dBias
	)

Definition at line 981 of file probe_collection.cxx.

References ArbProbeMatchWeighting::setParameters().

Referenced by create_probe_design_variables(), and probe_collection_update_parameters().

void ArbProbeCollection::getParameters	(	float	aValues[16],
		float &	dWidth,
		float &	dBias
	)		const

Definition at line 989 of file probe_collection.cxx.

References ArbProbeMatchWeighting::getParameters().

Referenced by create_probe_design_variables(), and load_probe_collection().

const ArbProbePtrList& ArbProbeCollection::probeList ( ) const

inline

Definition at line 218 of file probe_collection.hxx.

Referenced by load_probe_collection(), probe_collection_update_parameters(), probe_match_with_specificity_event(), and refresh_matchedProbesDisplay_cb().

const ArbProbeMatchWeighting& ArbProbeCollection::matchWeighting ( ) const

inline

Definition at line 219 of file probe_collection.hxx.

Referenced by probe_match_with_specificity_event().

const ArbProbe * ArbProbeCollection::find

(

const char *

pSequence

)

const

Definition at line 1003 of file probe_collection.cxx.

References NULp.

Referenced by remove_probe_from_collection_event(), selected_probe_changed_cb(), and target_string_changed_cb().

bool ArbProbeCollection::add	(	const char *	pName,
		const char *	pSequence,
		const ArbProbe **	ppProbe = NULp
	)

Definition at line 1015 of file probe_collection.cxx.

Referenced by create_probe_design_variables(), and openXML().

bool ArbProbeCollection::replace	(	const char *	oldSequence,
		const char *	pName,
		const char *	pSequence,
		const ArbProbe **	ppProbe = NULp
	)

Definition at line 1034 of file probe_collection.cxx.

bool ArbProbeCollection::remove

(

const char *

pSequence

)

Definition at line 1056 of file probe_collection.cxx.

References ArbRefCount::free(), ArbProbe::sequence(), and string().

Referenced by remove_probe_from_collection_event().

bool ArbProbeCollection::clear

(

)

Definition at line 1083 of file probe_collection.cxx.

Referenced by create_probe_design_variables().

void ArbProbeCollection::name

(

const char *

pName

)

Definition at line 1098 of file probe_collection.cxx.

Referenced by ArbProbeCollection(), and operator=().

const std::string& ArbProbeCollection::name ( ) const

inline

Definition at line 229 of file probe_collection.hxx.

Referenced by ArbProbeCollection(), openXML(), and operator=().

bool ArbProbeCollection::hasChanged ( ) const

inline

Definition at line 231 of file probe_collection.hxx.

bool ArbProbeCollection::hasProbes ( ) const

inline

Definition at line 232 of file probe_collection.hxx.

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The documentation for this class was generated from the following files:

• PROBE_DESIGN/probe_collection.hxx
• PROBE_DESIGN/probe_collection.cxx