ArbProbe Class Reference

#include <probe_collection.hxx>

Inheritance diagram for ArbProbe:

Collaboration diagram for ArbProbe:

Public Member Functions
	ArbProbe ()
	ArbProbe (const char *pName, const char *pSequence)
	ArbProbe (const ArbProbe &rCopy)
virtual	~ArbProbe ()
void	writeXML (FILE *hFile, const char *pPrefix) const
void	nameAndSequence (const char *pName, const char *pSequence)
const std::string &	name () const
const std::string &	sequence () const
const std::string &	displayName () const
int	allowedMismatches () const
Public Member Functions inherited from ArbRefCount
	ArbRefCount ()
	ArbRefCount (const ArbRefCount &)
virtual	~ArbRefCount ()
void	lock () const
bool	unlock () const
void	free () const

Detailed Description

Definition at line 160 of file probe_collection.hxx.

Constructor & Destructor Documentation

ArbProbe::ArbProbe

(

)

Definition at line 543 of file probe_collection.cxx.

ArbProbe::ArbProbe	(	const char *	pName,
		const char *	pSequence
	)

Definition at line 554 of file probe_collection.cxx.

References nameAndSequence().

ArbProbe::ArbProbe

(

const ArbProbe &

rCopy

)

Definition at line 565 of file probe_collection.cxx.

References nameAndSequence().

ArbProbe::~ArbProbe ( )

virtual

Definition at line 580 of file probe_collection.cxx.

Member Function Documentation

void ArbProbe::writeXML	(	FILE *	hFile,
		const char *	pPrefix
	)		const

Definition at line 586 of file probe_collection.cxx.

Referenced by ArbProbeCollection::saveXML().

void ArbProbe::nameAndSequence	(	const char *	pName,
		const char *	pSequence
	)

Definition at line 592 of file probe_collection.cxx.

References arb_assert.

Referenced by ArbProbe().

const std::string& ArbProbe::name ( ) const

inline

Definition at line 175 of file probe_collection.hxx.

Referenced by ProbeCollDisplay::get_marker_name(), save_probe_list_to_DB(), selected_probe_changed_cb(), and ArbMatchResult::weightAndResult().

const std::string& ArbProbe::sequence ( ) const

inline

Definition at line 176 of file probe_collection.hxx.

Referenced by ArbMatchResultsManager::addResultSet(), ProbeCollDisplay::handle_click(), hasSequence::operator()(), probe_match_with_specificity_event(), ArbProbeCollection::remove(), save_probe_list_to_DB(), selected_probe_changed_cb(), and show_probes_in_sellist().

const std::string& ArbProbe::displayName ( ) const

inline

Definition at line 177 of file probe_collection.hxx.

Referenced by add_probe_to_collection_event(), modify_probe_event(), and show_probes_in_sellist().

int ArbProbe::allowedMismatches

(

)

const

Definition at line 614 of file probe_collection.cxx.

References ArbMIN_PROBE_LENGTH.

Referenced by probe_match_with_specificity_event().

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The documentation for this class was generated from the following files:

• PROBE_DESIGN/probe_collection.hxx
• PROBE_DESIGN/probe_collection.cxx