CT_common.hxx File Reference

#include <TreeNode.h>
#include <arb_strarray.h>
#include <arb_progress.h>
#include <map>
#include <vector>
#include <string>

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Classes
struct	SizeAwareRoot
class	FINAL_TYPE< SEQTYPE >
	xml element More...
class	TreeInfo
class	TreeContainer
class	SpeciesSpace
class	DeconstructedTree
class	TreeParts

Namespaces
	PART_FWD

Enumerations
enum	DeconstructionMode { DMODE_CONSENSUS_TREE, DMODE_ROOTSYNC }

Functions
const TreeNode *	PART_FWD::get_origin (const PART *part)
int	PART_FWD::get_members (const PART *part)
void	PART_FWD::destroy_part (PART *part)
int	PART_FWD::calcDistance (const PART *e1, const PART *e2, const PART *t1, const PART *t2)
bool	represents_existing_edge (const PART *p)
typedef	SmartCustomPtr (PART, PART_FWD::destroy_part) PART_Ptr

Enumeration Type Documentation

enum DeconstructionMode

Enumerator
DMODE_CONSENSUS_TREE
DMODE_ROOTSYNC

Definition at line 194 of file CT_common.hxx.

Function Documentation

bool represents_existing_edge ( const PART *  p )

inline

Definition at line 241 of file CT_common.hxx.

References PART_FWD::get_origin().

Referenced by RootSynchronizer::find_best_matching_PART_in(), and RootSynchronizer::find_worst_matching_PART_in().

typedef SmartCustomPtr	(	PART	,
		PART_FWD::destroy_part
	)