ARB
PrimerDesign Member List

This is the complete list of members for PrimerDesign, including all inherited members.

buildPrimerTrees()PrimerDesign
convertTreesToLists()PrimerDesign
evaluatePrimerPairs()PrimerDesign
get_error() const PrimerDesigninline
get_max_primer_length() const PrimerDesigninline
get_max_primer_pos() const PrimerDesigninline
get_result(int num, const char *&primers, int max_primer_length, int max_position_length, int max_length_length) const PrimerDesign
matchSequenceAgainstPrimerTrees()PrimerDesign
Noncopyable()Noncopyableinlineprivate
PrimerDesign(const char *sequence_, long int seqLength_, Range pos1_, Range pos2_, Range length_, Range distance_, Range ratio_, Range temperature_, int min_dist_to_next_, bool expand_IUPAC_Codes_, int max_count_primerpairs_, double GC_factor_, double temp_factor_)PrimerDesign
PrimerDesign(const char *sequence_, long int seqLength_, Range pos1_, Range pos2_, Range length_, Range distance_, int max_count_primerpairs_, double GC_factor_, double temp_factor_)PrimerDesign
PrimerDesign(const char *sequence_, long int seqLength_)PrimerDesign
PRINT_MATCHED_TREESPrimerDesignstatic
PRINT_PRIMER_LISTSPrimerDesignstatic
PRINT_PRIMER_PAIRSPrimerDesignstatic
PRINT_RAW_TREESPrimerDesignstatic
run()PrimerDesign
setConditionalParameters(Range ratio_, Range temperature_, int min_dist_to_next_, bool expand_IUPAC_Codes_, int max_count_primerpairs_, double GC_factor_, double temp_factor_)PrimerDesign
setPositionalParameters(Range pos1_, Range pos2_, Range length_, Range distance_)PrimerDesign
~PrimerDesign()PrimerDesign