ARB
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ReadSeqVars Struct Reference
Collaboration diagram for ReadSeqVars:
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Public Attributes

short choice
 
short err
 
short nseq
 
long seqlen
 
long maxseq
 
long seqlencount
 
short topnseq
 
long topseqlen
 
const charfname
 
charseq
 
charseqid
 
char matchchar
 
boolean allDone
 
boolean done
 
boolean filestart
 
boolean addit
 
FILE * f
 
long linestart
 
char s [256]
 
charsp
 
int(* isseqcharfirst8 )()
 
int(* isseqchar )()
 

Detailed Description

Definition at line 98 of file ureadseq.c.

Member Data Documentation

short ReadSeqVars::choice
short ReadSeqVars::err

Definition at line 99 of file ureadseq.c.

Referenced by addseq(), readSeq(), readSeqFp(), and readSeqMain().

short ReadSeqVars::nseq
long ReadSeqVars::seqlen
long ReadSeqVars::maxseq

Definition at line 100 of file ureadseq.c.

Referenced by addseq(), readSeq(), and readSeqFp().

long ReadSeqVars::seqlencount
short ReadSeqVars::topnseq
long ReadSeqVars::topseqlen
const char* ReadSeqVars::fname

Definition at line 103 of file ureadseq.c.

Referenced by readPlain(), readSeq(), and readSeqFp().

char* ReadSeqVars::seq

Definition at line 104 of file ureadseq.c.

Referenced by addseq(), readSeq(), readSeqFp(), and readSeqMain().

char * ReadSeqVars::seqid
char ReadSeqVars::matchchar

Definition at line 104 of file ureadseq.c.

Referenced by readPAUPinterleaved(), and readSeqMain().

boolean ReadSeqVars::allDone
boolean ReadSeqVars::done
boolean ReadSeqVars::filestart

Definition at line 105 of file ureadseq.c.

Referenced by readSeq(), readSeqFp(), and readSeqMain().

boolean ReadSeqVars::addit
FILE* ReadSeqVars::f
long ReadSeqVars::linestart

Definition at line 107 of file ureadseq.c.

Referenced by GetLine(), readSeqMain(), seqFileFormatFp(), and unGetLine().

char ReadSeqVars::s[256]
char * ReadSeqVars::sp

Definition at line 108 of file ureadseq.c.

Referenced by seqFileFormatFp().

int(* ReadSeqVars::isseqcharfirst8)()

Definition at line 110 of file ureadseq.c.

Referenced by addseq(), readGenBank(), readSeq(), and readSeqFp().

int(* ReadSeqVars::isseqchar)()

Definition at line 111 of file ureadseq.c.

Referenced by addinfo(), addseq(), countseq(), readGenBank(), readSeq(), and readSeqFp().


The documentation for this struct was generated from the following file: