GDE_global.cxx

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// ================================================================ //
//                                                                  //
//   File      : GDE_global.cxx                                     //
//   Purpose   : Global data for GDE interface                      //
//                                                                  //
//   Institute of Microbiology (Technical University Munich)        //
//   http://www.arb-home.de/                                        //
//                                                                  //
// ================================================================ //

int  DataType;
int  FileFormat;
char FileName[80];

// Months of the year
const char *GDEmonth[] = {
    "-JAN-", "-FEB-", "-MAR-", "-APR-", "-MAY-", "-JUN-",
    "-JUL-", "-AUG-", "-SEP-", "-OCT-", "-NOV-", "-DEC-"
};

// Tables for DNA/RNA <--> ASCII translation
int Default_RNA_Trans[128] = {
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // Upper
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // lower
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // Upper select
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // lwr select
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // extended
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // extended
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // extended
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // extended
};

int Default_DNA_Trans[128] = {
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // Upper
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // lower
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // Upper select
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // lwr select
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // extended
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // extended
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', // extended
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', // extended
};

int Default_NA_RTrans[128] = {
    0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
    0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0x10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
    // Upper case alpha
    0x01, 0xe, 0x02, 0x0d, 0, 0, 0x04, 0x0b, 0, 0, 0x0c, 0, 0x03, 0x0f, 0, 0, 0, 0x05, 0x06, 0x08,
    0x08, 0x07, 0x09, 0x0f, 0xa, 0, 0, 0, 0, 0, 0, 0,
    // Lower case alpha
    0x11, 0x1e, 0x12, 0x1d, 0, 0, 0x14, 0x1b, 0, 0, 0x1c, 0, 0x13, 0x1f, 0, 0, 0, 0x15, 0x16, 0x18,
    0x18, 0x17, 0x19, 0x1f, 0x1a, 0, 0, 0, 0, 0x10, 0
};


// Character->color lookup table

int Default_NAColor_LKUP[128] = {
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13
};

int Default_PROColor_LKUP[128] = {
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 2, 8, 3, 8, 8, 6, 2, 4, 5, 12, 4, 5, 5, 8, 12, 2,
    8, 4, 2, 2, 12, 5, 6, 12, 6, 8, 12, 12, 12, 12, 12, 12,
    2, 8, 3, 8, 8, 6, 2, 4, 5, 12, 4, 5, 5, 8, 12, 2,
    8, 4, 2, 2, 12, 5, 6, 12, 6, 8, 12, 12, 12, 12, 12
};