GDE_global.cxx File Reference

Go to the source code of this file.

Variables
int	DataType
int	FileFormat
char	FileName [80]
const char *	GDEmonth []
int	Default_RNA_Trans [128]
int	Default_DNA_Trans [128]
int	Default_NA_RTrans [128]
int	Default_NAColor_LKUP [128]
int	Default_PROColor_LKUP [128]

Variable Documentation

int DataType

Definition at line 11 of file GDE_global.cxx.

Referenced by LoadData(), and LoadFile().

int FileFormat

Definition at line 12 of file GDE_global.cxx.

Referenced by LoadData().

char FileName[80]

Definition at line 13 of file GDE_global.cxx.

Referenced by LoadData().

const char* GDEmonth[]

Initial value:

= {
    "-JAN-", "-FEB-", "-MAR-", "-APR-", "-MAY-", "-JUN-",
    "-JUL-", "-AUG-", "-SEP-", "-OCT-", "-NOV-", "-DEC-"
}

Definition at line 16 of file GDE_global.cxx.

Referenced by AsciiTime(), and WriteGen().

int Default_RNA_Trans[128]

Initial value:

= {
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'U', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 'u', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
}

Definition at line 22 of file GDE_global.cxx.

Referenced by InitNASeq().

int Default_DNA_Trans[128]

Initial value:

= {
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '.', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
    '-', 'A', 'C', 'M', 'G', 'R', 'S', 'V', 'T', 'W', 'Y', 'H', 'K', 'D', 'B', 'N', 
    '~', 'a', 'c', 'm', 'g', 'r', 's', 'v', 't', 'w', 'y', 'h', 'k', 'd', 'b', 'n', 
}

Definition at line 33 of file GDE_global.cxx.

Referenced by InitNASeq().

int Default_NA_RTrans[128]

Initial value:

= {
    0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
    0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0x10, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
    
    0x01, 0xe, 0x02, 0x0d, 0, 0, 0x04, 0x0b, 0, 0, 0x0c, 0, 0x03, 0x0f, 0, 0, 0, 0x05, 0x06, 0x08,
    0x08, 0x07, 0x09, 0x0f, 0xa, 0, 0, 0, 0, 0, 0, 0,
    
    0x11, 0x1e, 0x12, 0x1d, 0, 0, 0x14, 0x1b, 0, 0, 0x1c, 0, 0x13, 0x1f, 0, 0, 0, 0x15, 0x16, 0x18,
    0x18, 0x17, 0x19, 0x1f, 0x1a, 0, 0, 0, 0, 0x10, 0
}

Definition at line 44 of file GDE_global.cxx.

Referenced by InitNASeq().

int Default_NAColor_LKUP[128]

Initial value:

= {
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13,
    13, 3, 6, 13, 8, 13, 13, 13, 5, 13, 13, 13, 13, 13, 13, 13
}

Definition at line 58 of file GDE_global.cxx.

Referenced by InitNASeq().

int Default_PROColor_LKUP[128]

Initial value:

= {
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12, 12,
    12, 2, 8, 3, 8, 8, 6, 2, 4, 5, 12, 4, 5, 5, 8, 12, 2,
    8, 4, 2, 2, 12, 5, 6, 12, 6, 8, 12, 12, 12, 12, 12, 12,
    2, 8, 3, 8, 8, 6, 2, 4, 5, 12, 4, 5, 5, 8, 12, 2,
    8, 4, 2, 2, 12, 5, 6, 12, 6, 8, 12, 12, 12, 12, 12
}

Definition at line 69 of file GDE_global.cxx.

Referenced by InitNASeq(), ReadGen(), and set_constant_fields().