This is the complete list of members for ArbParsimony, including all inherited members.

ArbParsimony()	ArbParsimony	inline
DEFINE_READ_ACCESSORS(AP_tree_nlen *, get_root_node, get_tree() ->get_root_node())	ArbParsimony
generate_tree(WeightedFilter *pars_weighted_filter)	ArbParsimony
get_tree() const	ArbParsimony	inline
kernighan_optimize_tree(AP_tree_nlen at, const KL_Settings &settings, const Mutations pars_global_start, bool dumpPerf)	ArbParsimony
optimize_tree(AP_tree_nlen *at, const KL_Settings &settings, arb_progress &progress)	ArbParsimony
set_tree(AWT_graphic_parsimony *tree_)	ArbParsimony