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SQ_GroupData_Impl< I > Member List
This is the complete list of members for
SQ_GroupData_Impl< I >
, including all inherited members.
avg_bases
SQ_GroupData
protected
clone
() const =0
SQ_GroupData
pure virtual
consensus
SQ_GroupData_Impl< I >
protected
gc_prop
SQ_GroupData
protected
getSize
() const
SQ_GroupData
inline
initialized
SQ_GroupData
protected
nr_sequences
SQ_GroupData
protected
operator=
(const SQ_GroupData &Other) OVERRIDE
SQ_GroupData_Impl< I >
inline
virtual
size
SQ_GroupData
protected
SQ_add
(const SQ_GroupData &other) OVERRIDE
SQ_GroupData_Impl< I >
virtual
SQ_add_sequence
(const char *sequence)=0
SQ_GroupData
pure virtual
SQ_calc_consensus
(const char *sequence) const =0
SQ_GroupData
pure virtual
SQ_count_sequences
()
SQ_GroupData
inline
SQ_get_avg_bases
() const
SQ_GroupData
inline
SQ_get_avg_gc
() const
SQ_GroupData
inline
SQ_get_nr_sequences
() const
SQ_GroupData
inline
SQ_GroupData
()
SQ_GroupData
SQ_GroupData_Impl
()
SQ_GroupData_Impl< I >
inline
SQ_init_consensus
(int size) FINAL_OVERRIDE
SQ_GroupData_Impl< I >
virtual
SQ_is_initialized
() const
SQ_GroupData
inline
SQ_print_on_screen
() OVERRIDE
SQ_GroupData_Impl< I >
virtual
SQ_set_avg_bases
(int bases)
SQ_GroupData
inline
SQ_set_avg_gc
(double gc)
SQ_GroupData
inline
~SQ_GroupData
()
SQ_GroupData
virtual
~SQ_GroupData_Impl
() OVERRIDE
SQ_GroupData_Impl< I >
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