Public Member Functions | List of all members
Splits Class Reference

#include <pt_split.h>

Inheritance diagram for Splits:
Inheritance graph
Collaboration diagram for Splits:
Collaboration graph

Public Member Functions

 Splits ()
 Splits (const PT_local *locs)
double check (char base, char ref) const
- Public Member Functions inherited from MaxBond
 MaxBond (const PT_bond *bond)
double get_max_bond (int base) const

Additional Inherited Members

- Protected Member Functions inherited from MaxBond
 MaxBond ()

Detailed Description

Definition at line 90 of file pt_split.h.

Constructor & Destructor Documentation

Splits::Splits ( )

Definition at line 105 of file pt_split.h.

Splits::Splits ( const PT_local *  locs)

Definition at line 106 of file pt_split.h.

References PT_A, and PT_BASES.

Member Function Documentation

double Splits::check ( char  base,
char  ref 
) const

Definition at line 114 of file pt_split.h.

References is_std_base(), pt_assert, and safeCharIndex().

Referenced by MatchingOligo::bind_against(), and get_match_overlay().

The documentation for this class was generated from the following file: