ARB
|
#include <MultiProbe.hxx>
Public Attributes | |
char * | selected_probes |
char * | probelist |
char * | result_probes |
char * | result_probes_comment |
float | outside_mismatches_difference |
long | weightedmismatches |
long | complement |
long | no_of_mismatches |
long | no_of_probes |
long | singlemismatches |
long | ptserver |
long | probe_quality |
long | qualityborder_best |
long | emphasis |
long | ecolipos |
float | min_weight |
float | max_weight |
float | greyzone |
Definition at line 87 of file MultiProbe.hxx.
char* awar_vars::selected_probes |
Definition at line 88 of file MultiProbe.hxx.
char* awar_vars::probelist |
Definition at line 89 of file MultiProbe.hxx.
char* awar_vars::result_probes |
Definition at line 90 of file MultiProbe.hxx.
char* awar_vars::result_probes_comment |
Definition at line 91 of file MultiProbe.hxx.
float awar_vars::outside_mismatches_difference |
Definition at line 92 of file MultiProbe.hxx.
Referenced by probe_combi_statistic::calc_fitness(), Sondentopf::fill_Stat_Arrays(), Sondentopf::gen_color_hash(), Sonde::gen_Hitliste(), MP_mark_probes_in_tree(), and MP_show_probes_in_tree().
long awar_vars::weightedmismatches |
Definition at line 93 of file MultiProbe.hxx.
Referenced by Sonde::gen_Hitliste().
long awar_vars::complement |
Definition at line 94 of file MultiProbe.hxx.
Referenced by Sonde::gen_Hitliste().
long awar_vars::no_of_mismatches |
Definition at line 95 of file MultiProbe.hxx.
Referenced by MP_modify_selected().
long awar_vars::no_of_probes |
Definition at line 96 of file MultiProbe.hxx.
Referenced by ST_Container::cache_Sonde(), probe_combi_statistic::calc_fitness(), probe_combi_statistic::calc_index_system3(), Generation::calcFitness(), probe_combi_statistic::check_duplicates(), probe_combi_statistic::crossover_Probes(), ProbeValuation::evolution(), Sondentopf::fill_Stat_Arrays(), Sondentopf::gen_color_hash(), Generation::gen_determ_combis(), Sondentopf::gen_Mergefeld(), Hit::Hit(), init_system3_tab(), Generation::init_valuation(), GenerationDuplicates::insert(), ProbeValuation::insert_in_result_list(), MP_compute(), MP_mark_probes_in_tree(), MP_show_probes_in_tree(), probe_combi_statistic::mutate_Probe(), probe_combi_statistic::print(), probe_combi_statistic::probe_combi_statistic(), probe_tabs::probe_tabs(), and ProbeValuation::ProbeValuation().
long awar_vars::singlemismatches |
Definition at line 97 of file MultiProbe.hxx.
Referenced by MP_gen_quality(), MP_gen_singleprobe(), and MP_new_sequence().
long awar_vars::ptserver |
Definition at line 98 of file MultiProbe.hxx.
Referenced by Sonde::gen_Hitliste(), and ST_Container::ST_Container().
long awar_vars::probe_quality |
Definition at line 99 of file MultiProbe.hxx.
Referenced by MP_gen_quality(), MP_gen_singleprobe(), and MP_new_sequence().
long awar_vars::qualityborder_best |
Definition at line 100 of file MultiProbe.hxx.
Referenced by probe_combi_statistic::calc_fitness().
long awar_vars::emphasis |
Definition at line 101 of file MultiProbe.hxx.
long awar_vars::ecolipos |
Definition at line 102 of file MultiProbe.hxx.
Referenced by MP_gen_singleprobe().
float awar_vars::min_weight |
Definition at line 103 of file MultiProbe.hxx.
float awar_vars::max_weight |
Definition at line 104 of file MultiProbe.hxx.
float awar_vars::greyzone |
Definition at line 105 of file MultiProbe.hxx.
Referenced by Sondentopf::fill_Stat_Arrays(), Sondentopf::gen_color_hash(), and Sonde::gen_Hitliste().