ed4_seq_colors.hxx File Reference

#include <arbtools.h>
#include <cstring>
#include <arb_assert.h>
#include <cctype>

Include dependency graph for ed4_seq_colors.hxx:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Classes
class	ED4_seq_colors
class	ED4_reference

Macros
#define	e4_assert(bed)   arb_assert(bed)

Functions
AW_window *	ED4_create_seq_colors_window (AW_root *awr, ED4_seq_colors *sc)
AW_window *	ED4_create_viewDifferences_window (AW_root *awr)
void	ED4_toggle_viewDifferences (AW_root *awr)
void	ED4_viewDifferences_setNewReference ()
void	ED4_viewDifferences_disable ()
void	ED4_viewDifferences_announceTerminalChange ()

Macro Definition Documentation

#define e4_assert

(

bed

)

arb_assert(bed)

Definition at line 28 of file ed4_seq_colors.hxx.

Referenced by ED4_reference::reference_species_is().

Function Documentation

AW_window* ED4_create_seq_colors_window	(	AW_root *	awr,
		ED4_seq_colors *	sc
	)

Definition at line 118 of file ED4_seq_colors.cxx.

References AW_HORIZONTAL, AW_POPDOWN(), AWAR_SEQ_NAME_SELECTOR_AA, AWAR_SEQ_NAME_SELECTOR_NA, AWAR_SEQ_NAME_STRINGS_TEMPLATE, AWAR_SEQ_NAME_TEMPLATE, create_seq_color_awars(), makeHelpCallback(), NULp, seq_color_awars_created, SEQ_COLOR_SET_ELEMS, and SEQ_COLOR_SETS.

Referenced by ED4_CreateProteinViewer_window(), and ED4_root::generate_window().

AW_window* ED4_create_viewDifferences_window

(

AW_root *

awr

)

Definition at line 551 of file ED4_seq_colors.cxx.

References AW_POPDOWN(), AWAR_DIFF_GAPTYPES, AWAR_DIFF_MINDCASE, AWAR_DIFF_MINDGAPTYPE, AWAR_DIFF_NAME, AWAR_DIFF_TYPE, AWAR_NODIFF_INDICATOR, change_reference_cb(), ED4_ROOT, ED4_toggle_viewDifferences(), ED4_reference::is_set(), makeHelpCallback(), NULp, ED4_root::reference, VD_DISABLED, VD_FOLLOW, and VD_SELECTED.

Referenced by ED4_root::generate_window().

void ED4_toggle_viewDifferences

(

AW_root *

awr

)

Definition at line 518 of file ED4_seq_colors.cxx.

References AW_root::awar(), AWAR_DIFF_TYPE, create_viewDifferences_awars(), ED4_ROOT, ED4_reference::is_set(), AW_awar::read_int(), ED4_root::reference, AW_awar::rewrite_int(), update_reference_settings(), VD_DISABLED, and VD_SELECTED.

Referenced by ED4_create_viewDifferences_window().

void ED4_viewDifferences_setNewReference

(

)

Definition at line 537 of file ED4_seq_colors.cxx.

References set_current_as_diffRef().

Referenced by ED4_viewDifferences_announceTerminalChange().

void ED4_viewDifferences_disable

(

)

Definition at line 547 of file ED4_seq_colors.cxx.

References set_current_as_diffRef().

Referenced by refdata_deleted_cb(), and ED4_root::remove_all_callbacks().

void ED4_viewDifferences_announceTerminalChange

(

)

Definition at line 540 of file ED4_seq_colors.cxx.

References ED4_root::aw_root, AW_root::awar(), AWAR_DIFF_TYPE, ED4_ROOT, ED4_viewDifferences_setNewReference(), ED4_reference::is_set(), AW_awar::read_int(), ED4_root::reference, and VD_FOLLOW.