ARB
TranslateRealign.h
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1 // ============================================================== //
2 // //
3 // File : TranslateRealign.h //
4 // Purpose : Translate and realign interface //
5 // //
6 // Coded by Ralf Westram (coder@reallysoft.de) in August 2014 //
7 // http://www.arb-home.de/ //
8 // //
9 // ============================================================== //
10 
11 #ifndef TRANSLATEREALIGN_H
12 #define TRANSLATEREALIGN_H
13 
14 #ifndef ARBDB_BASE_H
15 #include <arbdb_base.h>
16 #endif
17 
18 #define AUTODETECT_STARTPOS 3
19 
20 GB_ERROR ALI_translate_marked(GBDATA *gb_main, bool use_entries, bool save_entries, int selected_startpos, bool translate_all, const char *ali_source, const char *ali_dest);
21 GB_ERROR ALI_realign_marked(GBDATA *gb_main, const char *ali_source, const char *ali_dest, size_t& neededLength, bool unmark_succeeded, bool cutoff_dna);
22 
23 #else
24 #error TranslateRealign.h included twice
25 #endif // TRANSLATEREALIGN_H
const char * GB_ERROR
Definition: arb_core.h:25
GB_ERROR ALI_realign_marked(GBDATA *gb_main, const char *ali_source, const char *ali_dest, size_t &neededLength, bool unmark_succeeded, bool cutoff_dna)
GBDATA * gb_main
Definition: adname.cxx:33
GB_ERROR ALI_translate_marked(GBDATA *gb_main, bool use_entries, bool save_entries, int selected_startpos, bool translate_all, const char *ali_source, const char *ali_dest)