#include <ali_prealigner.hxx>
Public Attributes | |
| long | max_number_of_maps |
| long | max_number_of_maps_aligner |
| int | interval_border |
| int | interval_center |
| float | max_cost_of_sub_percent |
| float | max_cost_of_helix |
| unsigned long | error_count |
Detailed Description
Definition at line 31 of file ali_prealigner.hxx.
Member Data Documentation
| long ALI_PREALIGNER_CONTEXT::max_number_of_maps |
Definition at line 32 of file ali_prealigner.hxx.
Referenced by ALI_PREALIGNER::ALI_PREALIGNER(), and ALI_GLOBAL::init().
| long ALI_PREALIGNER_CONTEXT::max_number_of_maps_aligner |
Definition at line 33 of file ali_prealigner.hxx.
Referenced by ALI_GLOBAL::init().
| int ALI_PREALIGNER_CONTEXT::interval_border |
Definition at line 34 of file ali_prealigner.hxx.
Referenced by ali_prealigner_mask::delete_expensive(), and ALI_GLOBAL::init().
| int ALI_PREALIGNER_CONTEXT::interval_center |
Definition at line 35 of file ali_prealigner.hxx.
Referenced by ali_prealigner_mask::delete_expensive(), and ALI_GLOBAL::init().
| float ALI_PREALIGNER_CONTEXT::max_cost_of_sub_percent |
Definition at line 36 of file ali_prealigner.hxx.
Referenced by ali_prealigner_mask::delete_expensive(), and ALI_GLOBAL::init().
| float ALI_PREALIGNER_CONTEXT::max_cost_of_helix |
Definition at line 37 of file ali_prealigner.hxx.
Referenced by ali_prealigner_mask::delete_expensive(), and ALI_GLOBAL::init().
| unsigned long ALI_PREALIGNER_CONTEXT::error_count |
Definition at line 38 of file ali_prealigner.hxx.
Referenced by ali_prealigner_mask::delete_expensive(), and ALI_GLOBAL::init().
The documentation for this struct was generated from the following file:
- NALIGNER/ali_prealigner.hxx
