Realigner Member List

This is the complete list of members for Realigner, including all inherited members.

clear_failure()	Realigner	inline
failure() const	Realigner	inline
get_needed_dest_alilen() const	Realigner	inline
realign_seq(TransTables &allowed, const char *const source, size_t source_len, const char *const dest, size_t dest_len, bool cutoff_dna)	Realigner	inline
Realigner(const char *ali_source_, const char *ali_dest_, size_t ali_len_)	Realigner	inline
set_failure(const char *reason)	Realigner	inline