ARB: PROBE/PT_findEx.cxx File Reference

ARB

PROBE

#include "probe.h"
#include <PT_server_prototypes.h>
#include "probe_tree.h"
#include "pt_prototypes.h"
#include <arb_strbuf.h>

Include dependency graph for PT_findEx.cxx:

Go to the source code of this file.

Functions
static bool	findLeftmostProbe (POS_TREE2 node, char probe, int restlen, int height)

static bool	findNextProbe (POS_TREE2 node, char probe, int restlen, int height)

int	PT_find_exProb (PT_exProb *pep, int)

Function Documentation

static bool findLeftmostProbe	(	POS_TREE2 *	node,
		char *	probe,
		int	restlen,
		int	height
	)

static

Definition at line 17 of file PT_findEx.cxx.

References probe_struct_global::data, probe_input_data::get_dataPtr(), AbsLoc::get_name(), DataLoc::get_rel_pos(), probe_input_data::get_size(), POS_TREE2::get_type(), implicated, psg, PT2_CHAIN, PT2_LEAF, PT2_NODE, PT_A, pt_assert, PT_BASES, PT_N, PT_QU, PT_read_son(), seq, and probe_input_data::valid_rel_pos().

Referenced by findNextProbe(), and PT_find_exProb().

static bool findNextProbe	(	POS_TREE2 *	node,
		char *	probe,
		int	restlen,
		int	height
	)

static

Definition at line 66 of file PT_findEx.cxx.

References findLeftmostProbe(), POS_TREE2::get_type(), implicated, is_std_base(), PT2_CHAIN, PT2_LEAF, PT2_NODE, pt_assert, PT_BASES, and PT_read_son().

Referenced by PT_find_exProb().

int PT_find_exProb	(	PT_exProb *	pep,
		int
	)

Definition at line 108 of file PT_findEx.cxx.

References GBS_strstruct::cat(), compress_data(), findLeftmostProbe(), findNextProbe(), psg, pt_assert, GBS_strstruct::put(), arb_test::readable(), readable_probe(), GBS_strstruct::release_memfriendly(), and probe_struct_global::TREE_ROOT2().