ARB
SpecSetRegistry Member List

This is the complete list of members for SpecSetRegistry, including all inherited members.

allocate_bitstring() const SpecSetRegistryinline
bitstring_bytes() const SpecSetRegistryinline
bitstring_longs() const SpecSetRegistryinline
find_best_matches_info(AP_tree *node, FILE *log, bool compare_node_info)SpecSetRegistry
finish(GB_ERROR &error)SpecSetRegistry
get_species_index(const char *species_name) const SpecSetRegistryinline
Noncopyable()Noncopyableinlineprivate
registerTree(AP_tree *node)SpecSetRegistry
search_best_match(const TSpecSet *tset, GroupPenalty &min_penalty)SpecSetRegistry
setScorer(const GroupMatchScorer &newScorer)SpecSetRegistryinline
SpecSetRegistry(long nspecies_, arb_progress *progress_, const GroupMatchScorer &scorer_)SpecSetRegistry
write_node_information(FILE *log, bool delete_old_nodes, GroupsToTransfer what, const char *aci)SpecSetRegistry
~SpecSetRegistry()SpecSetRegistry