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Macros | Functions | Variables
ST_ml.cxx File Reference
#include "st_ml.hxx"
#include "MostLikelySeq.hxx"
#include <ColumnStat.hxx>
#include <AP_filter.hxx>
#include <AP_Tree.hxx>
#include <arb_progress.h>
#include <gui_aliview.hxx>
#include <ad_cb.h>
#include <cctype>
#include <cmath>
Include dependency graph for ST_ml.cxx:

Go to the source code of this file.

Macros

#define GET_ML_VECTORS_BUG_WORKAROUND_INCREMENT   (ST_MAX_SEQ_PART-1)
 

Functions

static void st_sequence_callback (GBDATA *, MostLikelySeq *seq)
 
static void st_sequence_del_callback (GBDATA *, MostLikelySeq *seq)
 
GB_ERROR tree_size_ok (AP_tree_root *tree_root)
 

Variables

DNA_Table dna_table
 

Macro Definition Documentation

#define GET_ML_VECTORS_BUG_WORKAROUND_INCREMENT   (ST_MAX_SEQ_PART-1)

Definition at line 679 of file ST_ml.cxx.

Referenced by ST_ML::get_color_string(), and ST_ML::update_ml_likelihood().

Function Documentation

static void st_sequence_callback ( GBDATA ,
MostLikelySeq seq 
)
static
static void st_sequence_del_callback ( GBDATA ,
MostLikelySeq seq 
)
static
GB_ERROR tree_size_ok ( AP_tree_root tree_root)
inline

Variable Documentation

DNA_Table dna_table

Definition at line 24 of file ST_ml.cxx.