ARB
Candidate Member List

This is the complete list of members for Candidate, including all inherited members.

aidFoundGroupprotected
Candidate(bool is_species, const char *name_, GBDATA *gb_src, GBDATA *gb_dst, const CharPtrArray &ali_names)Candidateinline
Candidate(const FoundGroup &group_, GroupSearchTree *node_)Candidateinline
Candidate(GBDATA *gb_group_, GroupSearchTree *node_)Candidateinline
change_folding(GroupFoldingMode mode)FoundGroup
clusterIDFoundGroupprotected
delete_from_DB()FoundGroup
forget_cluster_id()FoundGroupinline
FoundGroup(GBDATA *gb_group_)FoundGroupinlineexplicit
gb_overlap_groupFoundGroupprotected
get_aid() const FoundGroupinline
get_clade()Candidateinline
get_clade() const Candidateinline
get_cluster_id() const FoundGroupinline
get_entry() const Candidateinline
get_group()Candidateinline
get_group() const Candidateinline
get_hit_reason() const FoundGroupinline
get_keeled() const FoundGroupinline
get_keeledStateInfo() const Candidateinline
get_marked() const FoundGroupinline
get_marked_pc() const FoundGroupinline
get_name() const Candidateinline
get_nesting() const FoundGroupinline
get_pointer() const FoundGroupinline
get_score() const Candidateinline
get_size() const FoundGroupinline
get_tree_data() const FoundGroup
get_tree_name() const FoundGroup
get_tree_order() const FoundGroup
has_alignments() const Candidateinline
hit_reasonFoundGroupprotected
inform_group(const GroupSearch &group_search, const string &hitReason)Candidateinline
is_folded() const FoundGroup
keeledFoundGroupprotected
knows_details() const FoundGroupinline
markedFoundGroupprotected
nestingFoundGroupprotected
operator<(const Candidate &other) const Candidateinline
operator==(const FoundGroup &other) const FoundGroupinline
overlap_is_folded() const FoundGroup
rename_by_ACI(const char *acisrt, const QueriedGroups &results, int hit_idx)FoundGroup
set_cluster_id(int id)FoundGroupinline
sizeFoundGroupprotected
track_max_widths(ColumnWidths &widths) const FoundGroup
~Candidate()Candidateinline