ARB
ARB_seqtree_root Member List

This is the complete list of members for ARB_seqtree_root, including all inherited members.

ARB_seqtree_root(AliView *aliView, AP_sequence *seqTempl, bool add_delete_callbacks)ARB_seqtree_root
change_root(TreeNode *old, TreeNode *newroot)TreeRootvirtual
DEFINE_READ_ACCESSORS(TreeNode *, get_root_node, rootNode)TreeRoot
DEFINE_TREE_ROOT_ACCESSORS(ARB_seqtree_root, ARB_seqtree)ARB_seqtree_root
delete_by_node()TreeRootinline
destroyNode(TreeNode *node) const =0TreeRootpure virtual
find_innermost_edge()TreeRoot
get_aliview() const ARB_seqtree_rootinline
get_filter() const ARB_seqtree_rootinline
get_gb_main() const ARB_seqtree_rootinline
get_gb_tree() const ARB_seqtree_rootinline
get_seqTemplate() const ARB_seqtree_rootinline
get_tree_name() const ARB_seqtree_rootinline
get_weights() const ARB_seqtree_rootinline
has_bootstrap() const TreeRootinline
linkToDB(int *zombies, int *duplicates) __ATTR__USERESULTARB_seqtree_root
loadFromDB(const char *name) __ATTR__USERESULTARB_seqtree_rootvirtual
makeNode() const =0TreeRootpure virtual
predelete()TreeRootinlineprotected
PREPARE_MARK_NONFINAL_CLASS(ARB_seqtree_root)ARB_seqtree_root
saveToDB() __ATTR__USERESULTARB_seqtree_rootvirtual
set_bootstrap_seen(bool seen)TreeRootinline
set_gb_tree(GBDATA *gbTree)ARB_seqtree_rootinlineprotected
set_gb_tree_and_name(GBDATA *gbTree, const char *name)ARB_seqtree_rootinlineprotected
tree_deleted_cb(GBDATA *gb_tree_del)ARB_seqtree_root
TreeRoot(bool deleteWithNodes_)TreeRootinlineexplicit
unlinkFromDB()ARB_seqtree_root
~ARB_seqtree_root() OVERRIDEARB_seqtree_root
~TreeRoot()TreeRootvirtual