GroupMatchScorer Member List

This is the complete list of members for GroupMatchScorer, including all inherited members.

calcUnknownMembersPenalty(const TSpecSet &sourceSet) const	GroupMatchScorer
check_validity() const	GroupMatchScorer
GroupMatchScorer()	GroupMatchScorer	inline
matchGroups(const TSpecSet &sourceSet, const RSpecSet &targetSet, long commonSpecies, long overallSpecies)	GroupMatchScorer
setLimits(const RatioLimits &ingroupLimits, const RatioLimits &outgroupLimits)	GroupMatchScorer	inline
setPerErrorPenalties(double ingroup_pep, double outgroup_pep, double unfound_pep)	GroupMatchScorer	inline
setRelativePenalties(double ingroup_inv_relpen, double outgroup_relpen)	GroupMatchScorer	inline