ARB
|
This is the complete list of members for SequenceAliData, including all inherited members.
AliData(size_t size_) | AliData | inline |
at_ptr(size_t pos) const OVERRIDE | SpecificAliData< char > | inlinevirtual |
BaseType typedef | SpecificAliData< char > | |
CHECK_DELETE enum value | AliData | |
check_delete_allowed(size_t start, size_t count) const | AliData | inline |
clear_error() const | AliData | inline |
cmp_data(size_t start, const AliData &other, size_t ostart, size_t count) const OVERRIDE | SpecificAliData< char > | inlinevirtual |
cmp_whole_data(const AliData &other) const | AliData | inline |
cmpPartWith(const void *mem, size_t start, size_t count) const | AliData | inline |
COMPARE_WITH enum value | AliData | |
COPY_TO enum value | AliData | |
copyPartTo(void *mem, size_t start, size_t count) const | AliData | inline |
copyTo(void *mem) const | AliData | inline |
create_gap(size_t gapsize, const UnitPair &gapinfo) const OVERRIDE | SequenceAliData | inlinevirtual |
differs_from(const AliData &other) const | AliData | inline |
elems() const | AliData | inline |
empty() const | AliData | inline |
equals(const AliData &other) const | AliData | inline |
get_allowed_size(size_t term_size, size_t new_ali_size) const | SizeAwarable | inline |
get_data() const | SpecificAliData< char > | inline |
has_slice() const OVERRIDE | TypedAliData< char > | inlinevirtual |
is_valid_between(size_t pos) const | AliData | inline |
is_valid_part(size_t start, size_t count) const | AliData | inline |
is_valid_pos(size_t pos) const | AliData | inline |
memop enum name | AliData | |
memsize() const | AliData | inline |
operate_on_mem(void *mem, size_t start, size_t count, AliData::memop op) const OVERRIDE | SpecificAliData< char > | inlinevirtual |
SequenceAliData(const char *static_data, size_t elements, char stdgap, char dotgap, const SizeAwarable &sizeAware, const Deletable &deletable_) | SequenceAliData | inline |
set_error(GB_ERROR error) const | AliData | inline |
SizeAwarable(bool allows_oversize_, size_t ali_size_) | SizeAwarable | inline |
slice_down(size_t, size_t) const OVERRIDE | TypedAliData< char > | inlinevirtual |
SpecificAliData(const char *static_data, size_t elements, const char &gap_, const SizeAwarable &sizeAware, const Deletable &deletable_) | SpecificAliData< char > | inline |
std_gap() const | TypedAliData< char > | inline |
std_gap_ptr() const | TypedAliData< char > | inlineprotected |
typed_ptr(const UnitPtr &uptr) | TypedAliData< char > | inlineprotectedstatic |
TypedAliData(size_t size_, chargap_) | TypedAliData< char > | inline |
unit_left_of(size_t pos) const OVERRIDE | TypedAliData< char > | inlinevirtual |
unit_right_of(size_t pos) const OVERRIDE | TypedAliData< char > | inlinevirtual |
unitsize() const OVERRIDE | TypedAliData< char > | inlinevirtual |
~AliData() | AliData | inlinevirtual |