#include <arbdb_base.h>
Include dependency graph for neighbourjoin.hxx:
This graph shows which files directly or indirectly include this file:
Go to the source code of this file.
Functions | |
| TreeNode * | neighbourjoining (const char *const *names, const AP_smatrix &smatrix, TreeRoot *troot) |
Function Documentation
| TreeNode* neighbourjoining | ( | const char *const * | names, |
| const AP_smatrix & | smatrix, | ||
| TreeRoot * | troot | ||
| ) |
Definition at line 203 of file NJ.cxx.
References TreeRoot::change_root(), father, TreeNode::father, PH_NEIGHBOURJOINING::get_dist(), PH_NEIGHBOURJOINING::get_last_ij(), PH_NEIGHBOURJOINING::get_min_ij(), TreeNode::get_tree_root(), PH_NEIGHBOURJOINING::join_nodes(), TreeNode::leftlen, TreeNode::leftson, TreeRoot::makeNode(), TreeNode::markAsLeaf(), TreeNode::name, NULp, TreeNode::rightlen, TreeNode::rightson, and symmetric_matrix< T >::size().
Referenced by di_calculate_tree_cb().
